Set default values for fixed priors (pa and pc) in cophe.single and cophe.susie
Updated diagnostics of mcmc chains in vignettes
Fixed prior information added in vignette
Submitted to CRAN
cophescan 1.3.22023-10-25
Changed one instance of print() to message()
cophescan 1.3.1
Changed plotting functions where querytrait and query_trait_names are now required arguments instead of optional in prepare_plot_data, get_beta, cophe_plot, cophe_heatmap.
reset global user parameters after running vignettes.
Updated vignettes
cophescan 1.3.0
Fixed minor note from CRAN auto-check of 1.2.0
cophescan 1.2.0
re-attempted CRAN submission but persistent note regarding access to internal functions
cophescan 1.1.0
1.1.0 CRAN re-submission
Fixed warnings from CRAN auto-check of 1.0.0
RcppArmadillo only in LinkingTo and removed from imports
Updated vignettes
cophescan 1.0.0
Passed local R CMD checks and tested on R 4.3.1
Prepared package for CRAN submission
cophescan 0.1.0
Github version
Added a NEWS.md file to track changes to the package.