Average of posterior probabilities: Hn, Ha and Hc — average_posterior_prob • cophescan

Average of posterior probabilities: Hn, Ha and Hc

Usage

average_posterior_prob(
  params,
  lbf_mat,
  nsnps,
  covar_vec,
  nits,
  thin,
  covar = FALSE
)

Arguments

params: Vector of parameters: \(\alpha\), \(\beta\) and \(\gamma\)
lbf_mat: matrix of log bayes factors: lBF.Ha and lBF.Hc
nsnps: number of snps
covar_vec: Vector of the covariate
nits: Number of iterations run in mcmc
thin: thinning
covar: logical: was the covariate information used? default: False

Value

matrix with average of all the posterior probabilities: Hn, Ha and Hc